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Plankton ML Documentation
=========================

Machine learning pipelines, embeddings search and backends for plankton image classification. Experimental in nature, designed to inform future work.

Features
--------

- FastAPI service for image embeddings
- Label Studio ML Backend for pre-annotations 
- Luigi pipeline for image processing
- DVC pipeline for model training

Contents
--------

.. toctree::
   :maxdepth: 2
   :caption: Contents:

   installation
   quickstart
   labelstudio
   api/modules
   api/cyto_ml.models 
   api/cyto_ml.data
   api/cyto_ml.pipeline
   api/cyto_ml.visualisation

Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`