Function reference
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ALEData
- ALE data
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calc_distance()
- Calculate the euclidean distance between a set of environmental predictor variables and mutliple taxa
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calc_distance_once()
- Calculate the euclidean distance between one set of environmental predictor variables and mutliple taxa
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envelope_filter()
- Apply an envelope model for a set of predictors for multiple taxa
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envelope_filter_taxon()
- Apply an envelope model for a set of predictors for one taxon
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env_filter()
- Retrieve the most suitable taxa for a given set of environmental variable values
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EUNISConstantTaxa
- EUNISConstantTaxa
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EUNISDiagnosticTaxa
- EUNISDiagnosticTaxa
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EUNISDominantTaxa
- EUNISDominantTaxa
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ExampleData1
- Example predictor data
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ExampleData2
- Example predictor data
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ExamplePlot
- The EVA plot used to form the example scenarios
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ExampleScenarios
- Predictor data for three example scenarios
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Gradients
- Univariate gradient intervals for each environmental variable
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HOAData
- HOA data
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Imbalances
- Presence-Absence Imbalances
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NicheWidths
- Niche width data
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PDPData
- PDP data
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PerformanceMeasures
- Model performance measures
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plot_me()
- Plot the marginal effect values for one or more taxa and set of variables
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predict_occ()
- Generate predictions for the probability of occurrence for specified taxa
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predict_occ_taxon()
- Generate predictions for the probability of occurrence
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shutdown()
- Remove the filehash database connection from the global environment
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startup()
- Initiliase a connection to the filehash database containing the Ecological Niche Models (ENMs)
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TaxonomicBackbone
- Taxonomic backbone
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VariableData
- Environmental indicator value data
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VariableLookup
- Environmental variable names and codes
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VariableNames
- Model variables codes