Package index
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ALEData - ALE data
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calc_distance() - Calculate the euclidean distance between a set of environmental predictor variables and mutliple taxa
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calc_distance_once() - Calculate the euclidean distance between one set of environmental predictor variables and mutliple taxa
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calc_overlap() - Calculate the niche overlap between a set of taxa
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envelope_filter() - Apply an envelope model for a set of predictors for multiple taxa
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envelope_filter_taxon() - Apply an envelope model for a set of predictors for one taxon
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env_filter() - Retrieve the most suitable taxa for a given set of environmental variable values
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EUNISConstantTaxa - EUNISConstantTaxa
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EUNISDiagnosticTaxa - EUNISDiagnosticTaxa
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EUNISDominantTaxa - EUNISDominantTaxa
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ExampleData1 - Example predictor data
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ExampleData2 - Example predictor data
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ExamplePlots - A set of example vegetation plots
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ExampleScenarios - Predictor data for three example scenarios
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extract_svs() - Extract the support vectors from an SVM model
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Gradients - Univariate gradient intervals for each environmental variable
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HOAData - HOA data
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Imbalances - Presence-Absence Imbalances
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MaximumProbabilities - Maximum Probabilities
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ModelledTaxaCodes - Taxon codes for taxa with models
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ModellingTaxaLookup - Modelling Taxa Lookup
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ModelObjectAvailability - Model Object Availability
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NicheWidths - Niche width data
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PDPData - PDP data
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PerformanceMeasures - Model performance measures
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plot_be() - Plot the bivariate effects for a taxon
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plot_me() - Plot the marginal effect values for one or more taxa and set of variables
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predict_occ() - Generate predictions for the probability of occurrence for specified taxa
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predict_occ_taxon() - Generate predictions for the probability of occurrence
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shutdown() - Remove the filehash database connection from the global environment
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startup() - Initiliase a connection to the filehash database containing the Ecological Niche Models (ENMs)
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TaxonomicBackbone - Taxonomic backbone
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VariableData - Environmental indicator value data
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VariableNames - Model variables codes
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VariableNamesLookup - Environmental variable names and codes