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Workshop

A_workshop.Rmd

Installing required packages

must have: RStudio with up to date R

  1. Install the “pacman” package which will facilitate the installation of all other required packages:

    #install.packages("pacman")

  2. Install all the required packages using pacman::p_load() - it should skip any packages that you already have installed.

    pacman::p_load(dplyr,forcats,gdistance,ggspatial,magrittr,memoise,methods,
                  nleqslv,purrr,raster,readr,readxl,rlang,sf,sp,stats,stringr,
                  tabularaster,tibble,tidyr,utils,ggplot2,gridExtra,sysfonts)

How to install seabORD

  1. unzip folder on computer and know the path to it (e.g.,):

    “C:/Users/madtig/Desktop/seabORD_pkg-main”

  2. open R Studio (not in the project of the zip file necessarily; just opening R should be enough)

    Run the following code in the console with your defined path:

path <- file.path("C:","Users","madtig","Desktop","seabORD_pkg-main", fsep = .Platform$file.sep)

#install.packages(pkgs = path, repos = NULL, type = "source")
  1. load the package in an R script:
library("seabORD")
  1. you can now follow the examples!